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Found 1346 results
2010
An J, Choi KPui, Wells CA, Chen Y-PPhoebe.  2010.  Identifying co-regulating microRNA groups.. J Bioinform Comput Biol. 8(1):99-115.
Liu H, Yue D, Chen Y, Gao S-J, Huang Y.  2010.  Improving performance of mammalian microRNA target prediction.. BMC Bioinformatics. 11:476.
Wang D, Wang J, Lu M, Song F, Cui Q.  2010.  Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases.. Bioinformatics. 26(13):1644-50.
Grinchuk OV, Jenjaroenpun P, Orlov YL, Zhou J, Kuznetsov VA.  2010.  Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns.. Nucleic Acids Res. 38(2):534-47.
Lachmann A, Ma'ayan A.  2010.  Lists2Networks: integrated analysis of gene/protein lists.. BMC Bioinformatics. 11:87.
Sales G, Coppe A, Bisognin A, Biasiolo M, Bortoluzzi S, Romualdi C.  2010.  MAGIA, a web-based tool for miRNA and Genes Integrated Analysis.. Nucleic Acids Res. 38(Web Server issue):W352-9.
Guerra-Assunção JAfonso, Enright AJ.  2010.  MapMi: automated mapping of microRNA loci.. BMC Bioinformatics. 11:133.
Gkirtzou K, Tsamardinos I, Tsakalides P, Poirazi P.  2010.  MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors.. PLoS One. 5(8):e11843.
Emde A-K, Grunert M, Weese D, Reinert K, Sperling SR.  2010.  MicroRazerS: rapid alignment of small RNA reads.. Bioinformatics. 26(1):123-4.
Barenboim M, Zoltick BJ, Guo Y, Weinberger DR.  2010.  MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets.. Hum Mutat. 31(11):1223-32.
Arshad S, Mumtaz A, Ahmad F, Liaquat S, Nadeem S, Mehboob S, Afzal M.  2010.  Mi-DISCOVERER: A bioinformatics tool for the detection of mi-RNA in human genome.. Bioinformation. 5(6):271-6.
Ritchie W, Flamant S, Rasko JEJ.  2010.  mimiRNA: a microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their targets.. Bioinformatics. 26(2):223-7.
Gaire RK, Bailey J, Bearfoot J, Campbell IG, Stuckey PJ, Haviv I.  2010.  MIRAGAA--a methodology for finding coordinated effects of microRNA expression changes and genome aberrations in cancer.. Bioinformatics. 26(2):161-7.
Griffiths-Jones S.  2010.  miRBase: microRNA sequences and annotation.. Curr Protoc Bioinformatics. Chapter 12:Unit12.9.1-10.
Barh D, Bhat D, Viero C.  2010.  miReg: a resource for microRNA regulation.. J Integr Bioinform. 7(1)
Mathelier A, Carbone A.  2010.  MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data.. Bioinformatics. 26(18):2226-34.
Ding J, Zhou S, Guan J.  2010.  MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features.. BMC Bioinformatics. 11 Suppl 11:S11.
Alexiou P, Vergoulis T, Gleditzsch M, Prekas G, Dalamagas T, Megraw M, Grosse I, Sellis T, Hatzigeorgiou AG.  2010.  miRGen 2.0: a database of microRNA genomic information and regulation.. Nucleic Acids Res. 38(Database issue):D137-41.
Jacobsen A, Krogh A, Kauppinen S, Lindow M.  2010.  miRMaid: a unified programming interface for microRNA data resources.. BMC Bioinformatics. 11:29.
Fahlgren N, Carrington JC.  2010.  miRNA Target Prediction in Plants.. Methods Mol Biol. 592:51-7.
Ronen R, Gan I, Modai S, Sukacheov A, Dror G, Halperin E, Shomron N.  2010.  miRNAkey: a software for microRNA deep sequencing analysis.. Bioinformatics. 26(20):2615-6.
Karali M, Peluso I, Gennarino VA, Bilio M, Verde R, Lago G, Dollé P, Banfi S.  2010.  miRNeye: a microRNA expression atlas of the mouse eye.. BMC Genomics. 11:715.
Le Brigand K, Robbe-Sermesant K, Mari B, Barbry P.  2010.  MiRonTop: mining microRNAs targets across large scale gene expression studies.. Bioinformatics. 26(24):3131-2.
Friedman Y, Naamati G, Linial M.  2010.  MiRror: a combinatorial analysis web tool for ensembles of microRNAs and their targets.. Bioinformatics. 26(15):1920-1.
Naeem H, Küffner R, Csaba G, Zimmer R.  2010.  miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature.. BMC Bioinformatics. 11:135.

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