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Biblio

Found 1346 results
2004
Chalk AM, Wahlestedt C, Sonnhammer ELL.  2004.  Improved and automated prediction of effective siRNA.. Biochem Biophys Res Commun. 319(1):264-74.
Lawrence CJ, Dong Q, Polacco ML, Seigfried TE, Brendel V.  2004.  MaizeGDB, the community database for maize genetics and genomics.. Nucleic Acids Res. 32(Database issue):D393-7.
Griffiths-Jones S.  2004.  The microRNA Registry.. Nucleic Acids Res. 32(Database issue):D109-11.
Wang X-J, Reyes JL, Chua N-H, Gaasterland T.  2004.  Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.. Genome Biol. 5(9):R65.
Han LYi, Cai CZhong, Lo SLin, Chung MCM, Chen YZong.  2004.  Prediction of RNA-binding proteins from primary sequence by a support vector machine approach.. RNA. 10(3):355-68.
Sachidanandam R.  2004.  RNAi: design and analysis.. Curr Protoc Bioinformatics. Chapter 12:Unit12.3.
Gunsalus KC, Yueh W-C, MacMenamin P, Piano F.  2004.  RNAiDB and PhenoBlast: web tools for genome-wide phenotypic mapping projects.. Nucleic Acids Res. 32(Database issue):D406-10.
Ding Y, Chan CYu, Lawrence CE.  2004.  Sfold web server for statistical folding and rational design of nucleic acids.. Nucleic Acids Res. 32(Web Server issue):W135-41.
Naito Y, Yamada T, Ui-Tei K, Morishita S, Saigo K.  2004.  siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference.. Nucleic Acids Res. 32(Web Server issue):W124-9.
Yuan B, Latek R, Hossbach M, Tuschl T, Lewitter F.  2004.  siRNA Selection Server: an automated siRNA oligonucleotide prediction server.. Nucleic Acids Res. 32(Web Server issue):W130-4.
Dudek P, Picard D.  2004.  TROD: T7 RNAi Oligo Designer.. Nucleic Acids Res. 32(Web Server issue):W121-3.
Wang L, Mu FY.  2004.  A Web-based design center for vector-based siRNA and siRNA cassette.. Bioinformatics. 20(11):1818-20.
2003
Le S-Y, Chen J-H, Konings D, Maizel JV.  2003.  Discovering well-ordered folding patterns in nucleotide sequences.. Bioinformatics. 19(3):354-61.
Stark A, Brennecke J, Russell RB, Cohen SM.  2003.  Identification of Drosophila MicroRNA targets.. PLoS Biol. 1(3):E60.
Enright AJ, John B, Gaul U, Tuschl T, Sander C, Marks DS.  2003.  MicroRNA targets in Drosophila.. Genome Biol. 5(1):R1.
Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, Bartel DP.  2003.  The microRNAs of Caenorhabditis elegans.. Genes Dev. 17(8):991-1008.
Ray WC, Daniels CJ.  2003.  PACRAT: a database and analysis system for archaeal and bacterial intergenic sequence features.. Nucleic Acids Res. 31(1):109-13.
Brown JWS, Echeverria M, Qu L-H, Lowe TM, Bachellerie J-P, Hüttenhofer A, Kastenmayer JP, Green PJ, Shaw P, Marshall DF.  2003.  Plant snoRNA database.. Nucleic Acids Res. 31(1):432-5.
Ambros V, Bartel B, Bartel DP, Burge CB, Carrington JC, Chen X, Dreyfuss G, Eddy SR, Griffiths-Jones S, Marshall M et al..  2003.  A uniform system for microRNA annotation.. RNA. 9(3):277-9.
Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP.  2003.  Vertebrate microRNA genes.. Science. 299(5612):1540.
Hofacker IL.  2003.  Vienna RNA secondary structure server.. Nucleic Acids Res. 31(13):3429-31.

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