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Found 1346 results
2010
Gruber AR, Findeiß S, Washietl S, Hofacker IL, Stadler PF.  2010.  RNAz 2.0: improved noncoding RNA detection.. Pac Symp Biocomput. :69-79.
Tolopko AN, Sullivan JP, Erickson SD, Wrobel D, Chiang SL, Rudnicki K, Rudnicki S, Nale J, Selfors LM, Greenhouse D et al..  2010.  Screensaver: an open source lab information management system (LIMS) for high throughput screening facilities.. BMC Bioinformatics. 11:260.
Pantano L, Estivill X, Martí E.  2010.  SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells.. Nucleic Acids Res. 38(5):e34.
Sarver AL, Phalak R, Thayanithy V, Subramanian S.  2010.  S-MED: sarcoma microRNA expression database.. Lab Invest. 90(5):753-61.
Fang G, Kuang R, Pandey G, Steinbach M, Myers CL, Kumar V.  2010.  Subspace differential coexpression analysis: problem definition and a general approach.. Pac Symp Biocomput. :145-56.
Bartonicek N, Enright AJ.  2010.  SylArray: a web server for automated detection of miRNA effects from expression data.. Bioinformatics. 26(22):2900-1.
Jia P, Sun J, Guo AY, Zhao Z.  2010.  SZGR: a comprehensive schizophrenia gene resource.. Mol Psychiatry. 15(5):453-62.
Lu M, Shi B, Wang J, Cao Q, Cui Q.  2010.  TAM: a method for enrichment and depletion analysis of a microRNA category in a list of microRNAs.. BMC Bioinformatics. 11:419.
Bonnet E, He Y, Billiau K, Van de Peer Y.  2010.  TAPIR, a web server for the prediction of plant microRNA targets, including target mimics.. Bioinformatics. 26(12):1566-8.
Huang FWD, Qin J, Reidys CM, Stadler PF.  2010.  Target prediction and a statistical sampling algorithm for RNA-RNA interaction.. Bioinformatics. 26(2):175-81.
Xie F, Zhang B.  2010.  Target-align: a tool for plant microRNA target identification.. Bioinformatics. 26(23):3002-3.
Sturm M, Hackenberg M, Langenberger D, Frishman D.  2010.  TargetSpy: a supervised machine learning approach for microRNA target prediction.. BMC Bioinformatics. 11:292.
Lou F, Clote P.  2010.  Thermodynamics of RNA structures by Wang-Landau sampling.. Bioinformatics. 26(12):i278-86.
Michon F, Tummers M, Kyyrönen M, Frilander MJ, Thesleff I.  2010.  Tooth morphogenesis and ameloblast differentiation are regulated by micro-RNAs.. Dev Biol. 340(2):355-68.
Kaimal V, Bardes EE, Tabar SC, Jegga AG, Aronow BJ.  2010.  ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems.. Nucleic Acids Res. 38(Web Server issue):W96-102.
Ulitsky I, Laurent LC, Shamir R.  2010.  Towards computational prediction of microRNA function and activity.. Nucleic Acids Res. 38(15):e160.
Wang J, Lu M, Qiu C, Cui Q.  2010.  TransmiR: a transcription factor-microRNA regulation database.. Nucleic Acids Res. 38(Database issue):D119-22.
Saito T, Sætrom P.  2010.  A two-step site and mRNA-level model for predicting microRNA targets.. BMC Bioinformatics. 11:612.
Gottlieb A, Varshavsky R, Linial M, Horn D.  2010.  UFFizi: a generic platform for ranking informative features.. BMC Bioinformatics. 11:300.
Korcsmáros T, Farkas IJ, Szalay MS, Rovó P, Fazekas D, Spiró Z, Böde C, Lenti K, Vellai T, Csermely P.  2010.  Uniformly curated signaling pathways reveal tissue-specific cross-talks and support drug target discovery.. Bioinformatics. 26(16):2042-50.
Mathews DH.  2010.  Using OligoWalk to identify efficient siRNA sequences.. Methods Mol Biol. 629:109-21.
Grillo G, Turi A, Licciulli F, Mignone F, Liuni S, Banfi S, Gennarino VAlessandro, Horner DS, Pavesi G, Picardi E et al..  2010.  UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs.. Nucleic Acids Res. 38(Database issue):D75-80.
Pelz O, Gilsdorf M, Boutros M.  2010.  web cellHTS2: a web-application for the analysis of high-throughput screening data.. BMC Bioinformatics. 11:185.
Chen D, Zhang F, Yuan C, Lu J, Li X, Chen M.  2010.  A web-based platform for rice microarray annotation and data analysis.. Sci China Life Sci. 53(12):1467-73.
Tyagi S, Stark MS, Hayward NK, Whiteman DC, Nancarrow DJ.  2010.  webFOG: A web tool to map genomic features onto genes.. Biochem Biophys Res Commun. 401(3):447-50.

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