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Found 1346 results
2010
Wang X.  2010.  Computational prediction of microRNA targets.. Methods Mol Biol. 667:283-95.
Kim YJ.  2010.  Computational siRNA design considering alternative splicing.. Methods Mol Biol. 623:81-92.
Han Y, Zhu B, Luan F, Zhu H, Shao Y, Chen A, Lu C, Luo Y.  2010.  Conserved miRNAs and their targets identified in lettuce (Lactuca) by EST analysis.. Gene. 463(1-2):1-7.
Yang Z, Ren F, Liu C, He S, Sun G, Gao Q, Yao L, Zhang Y, Miao R, Cao Y et al..  2010.  dbDEMC: a database of differentially expressed miRNAs in human cancers.. BMC Genomics. 11 Suppl 4:S5.
Yang J-H, Shao P, Zhou H, Chen Y-Q, Qu L-H.  2010.  deepBase: a database for deeply annotating and mining deep sequencing data.. Nucleic Acids Res. 38(Database issue):D123-30.
Horn T, Sandmann T, Boutros M.  2010.  Design and evaluation of genome-wide libraries for RNA interference screens.. Genome Biol. 11(6):R61.
Bashir A, Bansal V, Bafna V.  2010.  Designing deep sequencing experiments: detecting structural variation and estimating transcript abundance.. BMC Genomics. 11:385.
Alexiou P, Maragkakis M, Papadopoulos GL, Simmosis VA, Zhang L, Hatzigeorgiou AG.  2010.  The DIANA-mirExTra web server: from gene expression data to microRNA function.. PLoS One. 5(2):e9171.
Huang P-J, Liu Y-C, Lee C-C, Lin W-C, Gan RRuei-Chi, Lyu P-C, Tang P.  2010.  DSAP: deep-sequencing small RNA analysis pipeline.. Nucleic Acids Res. 38(Web Server issue):W385-91.
Tiemann K, Höhn B, Ehsani A, Forman SJ, Rossi JJ, Saetrom P.  2010.  Dual-targeting siRNAs.. RNA. 16(6):1275-84.
Sun C-H, Hwang T, Oh K, Yi G-S.  2010.  DynaMod: dynamic functional modularity analysis.. Nucleic Acids Res. 38(Web Server issue):W103-8.
Horn T, Boutros M.  2010.  E-RNAi: a web application for the multi-species design of RNAi reagents--2010 update.. Nucleic Acids Res. 38(Web Server issue):W332-9.
Gamazon ER, Im H-K, Duan S, Lussier YA, Cox NJ, M Dolan E, Zhang W.  2010.  Exprtarget: an integrative approach to predicting human microRNA targets.. PLoS One. 5(10):e13534.
Heikham R, Shankar R.  2010.  Flanking region sequence information to refine microRNA target predictions.. J Biosci. 35(1):105-18.
Sims D, Bursteinas B, Jain E, Gao Q, Baum B, Zvelebil M.  2010.  The FLIGHT Drosophila RNAi database: 2010 update.. Fly (Austin). 4(4):344-8.
Veksler-Lublinsky I, Shemer-Avni Y, Kedem K, Ziv-Ukelson M.  2010.  Gene bi-targeting by viral and human miRNAs.. BMC Bioinformatics. 11:249.
Gilsdorf M, Horn T, Arziman Z, Pelz O, Kiner E, Boutros M.  2010.  GenomeRNAi: a database for cell-based RNAi phenotypes. 2009 update.. Nucleic Acids Res. 38(Database issue):D448-52.
Gurtowski J, Cancio A, Shah H, Levovitz C, George A, Homann R, Sachidanandam R.  2010.  Geoseq: a tool for dissecting deep-sequencing datasets.. BMC Bioinformatics. 11:506.
Min H, Yoon S.  2010.  Got target? Computational methods for microRNA target prediction and their extension. Exp Mol Med. 42(4):233-44.
He B, Qiu X, Li P, Wang L, Lv Q, Shi T.  2010.  HCCNet: an integrated network database of hepatocellular carcinoma.. Cell Res. 20(6):732-4.
Seemann SE, Richter AS, Gorodkin J, Backofen R.  2010.  Hierarchical folding of multiple sequence alignments for the prediction of structures and RNA-RNA interactions.. Algorithms Mol Biol. 5:22.
Hartsperger ML, Strache R, Stümpflen V.  2010.  HiNO: an approach for inferring hierarchical organization from regulatory networks.. PLoS One. 5(11):e13698.
Wang L, Xiong Y, Sun Y, Fang Z, Li L, Ji H, Shi T.  2010.  HLungDB: an integrated database of human lung cancer research.. Nucleic Acids Res. 38(Database issue):D665-9.
Li S-C, Chan W-C, Hu L-Y, Lai C-H, Hsu C-N, Lin W-C.  2010.  Identification of homologous microRNAs in 56 animal genomes.. Genomics. 96(1):1-9.
Volinia S, Visone R, Galasso M, Rossi E, Croce CM.  2010.  Identification of microRNA activity by Targets' Reverse EXpression.. Bioinformatics. 26(1):91-7.

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