You are here

Home

Biblio

Found 1346 results
2012
Zhang Y, Xu B, Yang Y, Ban R, Zhang H, Jiang X, Cooke HJ, Xue Y, Shi Q.  2012.  CPSS: a computational platform for the analysis of small RNA deep sequencing data.. Bioinformatics. 28(14):1925-7.
Kunej T, Godnic I, Horvat S, Zorc M, Calin GA.  2012.  Cross talk between microRNA and coding cancer genes.. Cancer J. 18(3):223-31.
Brazas MD, Yim D, Yeung W, Ouellette BFFrancis.  2012.  A decade of Web Server updates at the Bioinformatics Links Directory: 2003-2012.. Nucleic Acids Res. 40(Web Server issue):W3-W12.
Yang J-H, Qu L-H.  2012.  DeepBase: annotation and discovery of microRNAs and other noncoding RNAs from deep-sequencing data.. Methods Mol Biol. 822:233-48.
Langenberger D, Pundhir S, Ekstrøm CT, Stadler PF, Hoffmann S, Gorodkin J.  2012.  deepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns.. Bioinformatics. 28(1):17-24.
Marco A, Griffiths-Jones S.  2012.  Detection of microRNAs in color space.. Bioinformatics. 28(3):318-23.
Artmann S, Jung K, Bleckmann A, Beissbarth T.  2012.  Detection of simultaneous group effects in microRNA expression and related target gene sets.. PLoS One. 7(6):e38365.
Vlachos IS, Kostoulas N, Vergoulis T, Georgakilas G, Reczko M, Maragkakis M, Paraskevopoulou MD, Prionidis K, Dalamagas T, Hatzigeorgiou AG.  2012.  DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.. Nucleic Acids Res. 40(Web Server issue):W498-504.
Li X, Jiang W, Li W, Lian B, Wang S, Liao M, Chen X, Wang Y, Lv Y, Wang S et al..  2012.  Dissection of human MiRNA regulatory influence to subpathway.. Brief Bioinform. 13(2):175-86.
Anders G, Mackowiak SD, Jens M, Maaskola J, Kuntzagk A, Rajewsky N, Landthaler M, Dieterich C.  2012.  doRiNA: a database of RNA interactions in post-transcriptional regulation.. Nucleic Acids Res. 40(Database issue):D180-6.
Gana NHTan, Victoriano AFB, Okamoto T.  2012.  Evaluation of online miRNA resources for biomedical applications.. Genes Cells. 17(1):11-27.
Mathivanan S, Fahner CJ, Reid GE, Simpson RJ.  2012.  ExoCarta 2012: database of exosomal proteins, RNA and lipids.. Nucleic Acids Res. 40(Database issue):D1241-4.
Simpson RJ, Kalra H, Mathivanan S.  2012.  ExoCarta as a resource for exosomal research.. J Extracell Vesicles. 1
Tempel S, Tahi F.  2012.  A fast ab-initio method for predicting miRNA precursors in genomes.. Nucleic Acids Res. 40(11):e80.
Ding J, Zhou S, Guan J.  2012.  Finding microRNA targets in plants: current status and perspectives.. Genomics Proteomics Bioinformatics. 10(5):264-75.
Flockhart IT, Booker M, Hu Y, McElvany B, Gilly Q, Mathey-Prevot B, Perrimon N, Mohr SE.  2012.  FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update.. Nucleic Acids Res. 40(Database issue):D715-9.
Lorenz R, Hofacker IL, Bernhart SH.  2012.  Folding RNA/DNA hybrid duplexes.. Bioinformatics. 28(19):2530-1.
Reczko M, Maragkakis M, Alexiou P, Grosse I, Hatzigeorgiou AG.  2012.  Functional microRNA targets in protein coding sequences.. Bioinformatics. 28(6):771-6.
Tabas-Madrid D, Nogales-Cadenas R, Pascual-Montano A.  2012.  GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics.. Nucleic Acids Res. 40(Web Server issue):W478-83.
Gong J, Tong Y, Zhang H-M, Wang K, Hu T, Shan G, Sun J, Guo A-Y.  2012.  Genome-wide identification of SNPs in microRNA genes and the SNP effects on microRNA target binding and biogenesis.. Hum Mutat. 33(1):254-63.
Ding J, Li D, Ohler U, Guan J, Zhou S.  2012.  Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach.. BMC Genomics. 13 Suppl 3:S3.
Bejarano F, Bortolamiol-Becet D, Dai Q, Sun K, Saj A, Chou Y-T, Raleigh DR, Kim K, Ni J-Q, Duan H et al..  2012.  A genome-wide transgenic resource for conditional expression of Drosophila microRNAs.. Development. 139(15):2821-31.
Zambon AC, Gaj S, Ho I, Hanspers K, Vranizan K, Evelo CT, Conklin BR, Pico AR, Salomonis N.  2012.  GO-Elite: a flexible solution for pathway and ontology over-representation.. Bioinformatics. 28(16):2209-10.
Li MJun, Wang P, Liu X, Lim ELyn, Wang Z, Yeager M, Wong MP, Sham PChung, Chanock SJ, Wang J.  2012.  GWASdb: a database for human genetic variants identified by genome-wide association studies.. Nucleic Acids Res. 40(Database issue):D1047-54.
Ogier A, Dorval T.  2012.  HCS-Analyzer: open source software for high-content screening data correction and analysis.. Bioinformatics. 28(14):1945-6.

Pages