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Found 1346 results
2014
Liu H, Zhu R, Lv J, He H, Yang L, Huang Z, Su J, Zhang Y, Yu S, Wu Q.  2014.  DevMouse, the mouse developmental methylome database and analysis tools.. Database (Oxford). 2014:bat084.
Bryan K, Terrile M, Bray IM, Domingo-Fernandéz R, Watters KM, Koster J, Versteeg R, Stallings RL.  2014.  Discovery and visualization of miRNA-mRNA functional modules within integrated data using bicluster analysis.. Nucleic Acids Res. 42(3):e17.
Lopes Ide ON, Schliep A, de Carvalho ACP de LF.  2014.  The discriminant power of RNA features for pre-miRNA recognition.. BMC Bioinformatics. 15:124.
Liu C-C, Tseng Y-T, Li W, Wu C-Y, Mayzus I, Rzhetsky A, Sun F, Waterman M, Chen JJW, Chaudhary PM et al..  2014.  DiseaseConnect: a comprehensive web server for mechanism-based disease-disease connections.. Nucleic Acids Res. 42(Web Server issue):W137-46.
Kurubanjerdjit N, Tsai JJP, Huang C-H, Ng K-L.  2014.  Disturbance of Arabidopsis thaliana microRNA-regulated pathways by Xcc bacterial effector proteins.. Amino Acids. 46(4):953-61.
Dai E, Yu X, Zhang Y, Meng F, Wang S, Liu X, Liu D, Wang J, Li X, Jiang W.  2014.  EpimiR: a database of curated mutual regulation between miRNAs and epigenetic modifications.. Database (Oxford). 2014:bau023.
Yuan T, Huang X, Dittmar RL, Du M, Kohli M, Boardman L, Thibodeau SN, Wang L.  2014.  eRNA: a graphic user interface-based tool optimized for large data analysis from high-throughput RNA sequencing.. BMC Genomics. 15:176.
Li L, Hu X, Yang Z, Jia Z, Fang M, Zhang L, Zhou Y.  2014.  Establishing reliable miRNA-cancer association network based on text-mining method.. Comput Math Methods Med. 2014:746979.
Guruceaga E, Segura V.  2014.  Functional interpretation of microRNA-mRNA association in biological systems using R.. Comput Biol Med. 44:124-31.
Wang S, Kim J, Jiang X, Brunner SF, Ohno-Machado L.  2014.  GAMUT: GPU accelerated microRNA analysis to uncover target genes through CUDA-miRanda.. BMC Med Genomics. 7 Suppl 1:S9.
Guo Z, Maki M, Ding R, Yang Y, Zhang B, Xiong L.  2014.  Genome-wide survey of tissue-specific microRNA and transcription factor regulatory networks in 12 tissues.. Sci Rep. 4:5150.
Li Y, Qiu C, Tu J, Geng B, Yang J, Jiang T, Cui Q.  2014.  HMDD v2.0: a database for experimentally supported human microRNA and disease associations.. Nucleic Acids Res. 42(Database issue):D1070-4.
Simon LM, Edelstein LC, Nagalla S, Woodley AB, Chen ES, Kong X, Ma L, Fortina P, Kunapuli S, Holinstat M et al..  2014.  Human platelet microRNA-mRNA networks associated with age and gender revealed by integrated plateletomics.. Blood. 123(16):e37-45.
Ghosal S, Das S, Sen R, Chakrabarti J.  2014.  HumanViCe: host ceRNA network in virus infected cells in human.. Front Genet. 5:249.
Xu W, San Lucas A, Wang Z, Liu Y.  2014.  Identifying microRNA targets in different gene regions.. BMC Bioinformatics. 15 Suppl 7:S4.
Li Y, Liang C, Wong K-C, Jin K, Zhang Z.  2014.  Inferring probabilistic miRNA-mRNA interaction signatures in cancers: a role-switch approach.. Nucleic Acids Res. 42(9):e76.
Xu Y, Guo M, Liu X, Wang C, Liu Y.  2014.  Inferring the soybean (Glycine max) microRNA functional network based on target gene network.. Bioinformatics. 30(1):94-103.
Meder B, Backes C, Haas J, Leidinger P, Stähler C, Großmann T, Vogel B, Frese K, Giannitsis E, Katus HA et al..  2014.  Influence of the confounding factors age and sex on microRNA profiles from peripheral blood.. Clin Chem. 60(9):1200-8.
Pio G, Malerba D, D'Elia D, Ceci M.  2014.  Integrating microRNA target predictions for the discovery of gene regulatory networks: a semi-supervised ensemble learning approach.. BMC Bioinformatics. 15 Suppl 1:S4.
Fujita KA, Ostaszewski M, Matsuoka Y, Ghosh S, Glaab E, Trefois C, Crespo I, Perumal TM, Jurkowski W, Antony PMA et al..  2014.  Integrating pathways of Parkinson's disease in a molecular interaction map.. Mol Neurobiol. 49(1):88-102.
Hsieh WJ, Lin F-M, Da Huang H-, Wang H.  2014.  Investigating microRNA-target interaction-supported tissues in human cancer tissues based on miRNA and target gene expression profiling.. PLoS One. 9(4):e95697.
Balwierz PJ, Pachkov M, Arnold P, Gruber AJ, Zavolan M, van Nimwegen E.  2014.  ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs.. Genome Res. 24(5):869-84.
Muller H, Marzi MJacopo, Nicassio F.  2014.  IsomiRage: From Functional Classification to Differential Expression of miRNA Isoforms.. Front Bioeng Biotechnol. 2:38.
Luo G-Z, Yang W, Ma Y-K, Wang X-J.  2014.  ISRNA: an integrative online toolkit for short reads from high-throughput sequencing data.. Bioinformatics. 30(3):434-6.
Russo F, Di Bella S, Bonnici V, Laganà A, Rainaldi G, Pellegrini M, Pulvirenti A, Giugno R, Ferro A.  2014.  A knowledge base for the discovery of function, diagnostic potential and drug effects on cellular and extracellular miRNAs.. BMC Genomics. 15 Suppl 3:S4.

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