You are here

Home

Biblio

Found 1346 results
2015
Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE.  2015.  The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease.. Nucleic Acids Res. 43(Database issue):D726-36.
Xu J, Li Y, Lu J, Pan T, Ding N, Wang Z, Shao T, Zhang J, Wang L, Li X.  2015.  The mRNA related ceRNA-ceRNA landscape and significance across 20 major cancer types.. Nucleic Acids Res. 43(17):8169-82.
Guo Z-W, Xie C, Yang J-R, Li J-H, Yang J-H, Zheng L.  2015.  MtiBase: a database for decoding microRNA target sites located within CDS and 5'UTR regions from CLIP-Seq and expression profile datasets.. Database (Oxford). 2015
Zhang Z, Jiang L, Wang J, Gu P, Chen M.  2015.  MTide: an integrated tool for the identification of miRNA-target interaction in plants.. Bioinformatics. 31(2):290-1.
Serra A, Fratello M, Fortino V, Raiconi G, Tagliaferri R, Greco D.  2015.  MVDA: a multi-view genomic data integration methodology.. BMC Bioinformatics. 16:261.
Anděl M, Kléma J, Krejčík Z.  2015.  Network-constrained forest for regularized classification of omics data.. Methods. 83:88-97.
Liang C, Li Y, Luo J, Zhang Z.  2015.  A novel motif-discovery algorithm to identify co-regulatory motifs in large transcription factor and microRNA co-regulatory networks in human.. Bioinformatics. 31(14):2348-55.
Capece V, Vizcaino JCGarcia, Vidal R, Rahman R-U, Centeno TPena, Shomroni O, Suberviola I, Fischer A, Bonn S.  2015.  Oasis: online analysis of small RNA deep sequencing data.. Bioinformatics. 31(13):2205-7.
Privitera AP, Distefano R, Wefer HA, Ferro A, Pulvirenti A, Giugno R.  2015.  OCDB: a database collecting genes, miRNAs and drugs for obsessive-compulsive disorder.. Database (Oxford). 2015:bav069.
Fisch KM, Meißner T, Gioia L, Ducom J-C, Carland TM, Loguercio S, Su AI.  2015.  Omics Pipe: a community-based framework for reproducible multi-omics data analysis.. Bioinformatics. 31(11):1724-8.
Tam S, Tsao M-S, McPherson JD.  2015.  Optimization of miRNA-seq data preprocessing.. Brief Bioinform. 16(6):950-63.
Pomyen Y, Segura M, Ebbels TMD, Keun HC.  2015.  Over-representation of correlation analysis (ORCA): a method for identifying associations between variable sets.. Bioinformatics. 31(1):102-8.
Šulc M, Marín RM, Robins HS, Vaníček J.  2015.  PACCMIT/PACCMIT-CDS: identifying microRNA targets in 3' UTRs and coding sequences.. Nucleic Acids Res. 43(W1):W474-9.
Yue Z, Kshirsagar MM, Nguyen T, Suphavilai C, Neylon MT, Zhu L, Ratliff T, Chen JY.  2015.  PAGER: constructing PAGs and new PAG-PAG relationships for network biology.. Bioinformatics. 31(12):i250-7.
Meckbach C, Tacke R, Hua X, Waack S, Wingender E, Gültas M.  2015.  PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information.. BMC Bioinformatics. 16:400.
Guo Q, Qu X, Jin W.  2015.  PhaseTank: genome-wide computational identification of phasiRNAs and their regulatory cascades.. Bioinformatics. 31(2):284-6.
Rhee S, Chae H, Kim S.  2015.  PlantMirnaT: miRNA and mRNA integrated analysis fully utilizing characteristics of plant sequencing data.. Methods. 83:80-7.
Yi X, Zhang Z, Ling Y, Xu W, Su Z.  2015.  PNRD: a plant non-coding RNA database.. Nucleic Acids Res. 43(Database issue):D982-9.
Agarwal V, Bell GW, Nam J-W, Bartel DP.  2015.  Predicting effective microRNA target sites in mammalian mRNAs.. Elife. 4
Xuan P, Han K, Guo Y, Li J, Li X, Zhong Y, Zhang Z, Ding J.  2015.  Prediction of potential disease-associated microRNAs based on random walk.. Bioinformatics. 31(11):1805-15.
Liu Z-P, Wu C, Miao H, Wu H.  2015.  RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse.. Database (Oxford). 2015
Nawrocki EP, Burge SW, Bateman A, Daub J, Eberhardt RY, Eddy SR, Floden EW, Gardner PP, Jones TA, Tate J et al..  2015.  Rfam 12.0: updates to the RNA families database.. Nucleic Acids Res. 43(Database issue):D130-7.
RNAcentral Consortium.  2015.  RNAcentral: an international database of ncRNA sequences.. Nucleic Acids Res. 43(Database issue):D123-9.
Tripathi A, Goswami K, Sanan-Mishra N.  2015.  Role of bioinformatics in establishing microRNAs as modulators of abiotic stress responses: the new revolution.. Front Physiol. 6:286.
Shen Y, Gao F, Wang M, Li A.  2015.  RPdb: a database of experimentally verified cellular reprogramming records.. Bioinformatics. 31(19):3237-9.

Pages