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Found 1346 results
2015
Tran VDu T, Tempel S, Zerath B, Zehraoui F, Tahi F.  2015.  miRBoost: boosting support vector machines for microRNA precursor classification.. RNA. 21(5):775-85.
Wong N, Wang X.  2015.  miRDB: an online resource for microRNA target prediction and functional annotations.. Nucleic Acids Res. 43(Database issue):D146-52.
Karathanasis N, Tsamardinos I, Poirazi P.  2015.  MiRduplexSVM: A High-Performing MiRNA-Duplex Prediction and Evaluation Methodology.. PLoS One. 10(5):e0126151.
Ulfenborg B, Jurcevic S, Lindlöf A, Klinga-Levan K, Olsson B.  2015.  miREC: a database of miRNAs involved in the development of endometrial cancer.. BMC Res Notes. 8:104.
Barh D, Kamapantula B, Jain N, Nalluri J, Bhattacharya A, Juneja L, Barve N, Tiwari S, Miyoshi A, Azevedo V et al..  2015.  miRegulome: a knowledge-base of miRNA regulomics and analysis.. Sci Rep. 5:12832.
Zielezinski A, Dolata J, Alaba S, Kruszka K, Pacak A, Swida-Barteczka A, Knop K, Stepien A, Bielewicz D, Pietrykowska H et al..  2015.  mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs.. BMC Plant Biol. 15:144.
Andrés-León E, Peña DGonzález, Gómez-López G, Pisano DG.  2015.  miRGate: a curated database of human, mouse and rat miRNA-mRNA targets.. Database (Oxford). 2015:bav035.
Baras AS, Mitchell CJ, Myers JR, Gupta S, Weng L-C, Ashton JM, Cornish TC, Pandey A, Halushka MK.  2015.  miRge - A Multiplexed Method of Processing Small RNA-Seq Data to Determine MicroRNA Entropy.. PLoS One. 10(11):e0143066.
Bonnal RJP, Rossi RL, Carpi D, Ranzani V, Abrignani S, Pagani M.  2015.  miRiadne: a web tool for consistent integration of miRNA nomenclature.. Nucleic Acids Res. 43(W1):W487-92.
Higashi S, Fournier C, Gautier C, Gaspin C, Sagot M-F.  2015.  Mirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing data.. BMC Bioinformatics. 16:179.
Le TDuy, Zhang J, Liu L, Liu H, Li J.  2015.  miRLAB: An R Based Dry Lab for Exploring miRNA-mRNA Regulatory Relationships.. PLoS One. 10(12):e0145386.
Cui H, Zhai J, Ma C.  2015.  miRLocator: Machine Learning-Based Prediction of Mature MicroRNAs within Plant Pre-miRNA Sequences.. PLoS One. 10(11):e0142753.
Kaushik A, Saraf S, Mukherjee SK, Gupta D.  2015.  miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data.. PeerJ. 3:e1332.
Liu B, Fang L, Chen J, Liu F, Wang X.  2015.  miRNA-dis: microRNA precursor identification based on distance structure status pairs.. Mol Biosyst. 11(4):1194-204.
Yones CA, Stegmayer G, Kamenetzky L, Milone DH.  2015.  miRNAfe: A comprehensive tool for feature extraction in microRNA prediction.. Biosystems. 138:1-5.
Shi J, Dong M, Li L, Liu L, Luz-Madrigal A, Tsonis PA, Del Rio-Tsonis K, Liang C.  2015.  mirPRo-a novel standalone program for differential expression and variation analysis of miRNAs.. Sci Rep. 5:14617.
Vergoulis T, Kanellos I, Kostoulas N, Georgakilas G, Sellis T, Hatzigeorgiou A, Dalamagas T.  2015.  mirPub: a database for searching microRNA publications.. Bioinformatics. 31(9):1502-4.
Jang I, Chang H, Jun Y, Park S, Yang JOk, Lee B, Kim W, V Kim N, Lee S.  2015.  miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data.. Bioinformatics. 31(4):596-8.
Wang P, Zhi H, Zhang Y, Liu Y, Zhang J, Gao Y, Guo M, Ning S, Li X.  2015.  miRSponge: a manually curated database for experimentally supported miRNA sponges and ceRNAs.. Database (Oxford). 2015
Jung D, Kim B, Freishtat RJ, Giri M, Hoffman E, Seo J.  2015.  miRTarVis: an interactive visual analysis tool for microRNA-mRNA expression profile data.. BMC Proc. 9(Suppl 6 Proceedings of the 5th Symposium on Biological Data):S2.
Cheng S, Guo M, Wang C, Liu X, Liu Y, Wu X.  2015.  MiRTDL: a deep learning approach for miRNA target prediction.. IEEE/ACM Trans Comput Biol Bioinform.
Li G, Ross KE, Arighi CN, Peng Y, Wu CH, Vijay-Shanker K.  2015.  miRTex: A Text Mining System for miRNA-Gene Relation Extraction.. PLoS Comput Biol. 11(9):e1004391.
Kullan JBelli, Pinto DLopes Paim, Bertolini E, Fasoli M, Zenoni S, Tornielli GBattista, Pezzotti M, Meyers BC, Farina L, Pè MEnrico et al..  2015.  miRVine: a microRNA expression atlas of grapevine based on small RNA sequencing.. BMC Genomics. 16:393.
Dweep H, Gretz N.  2015.  miRWalk2.0: a comprehensive atlas of microRNA-target interactions.. Nat Methods. 12(8):697.
M Çorapçıoğlu E, Oğul H.  2015.  miSEA: microRNA set enrichment analysis.. Biosystems. 134:37-42.

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