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Found 1346 results
2016
Mar-Aguilar F, Rodríguez-Padilla C, Reséndez-Pérez D.  2016.  Web-based tools for microRNAs involved in human cancer.. Oncol Lett. 11(6):3563-3570.
Pylro VSatler, Oliveira FSilva, Morais DKumazawa, Cuadros-Orellana S, Pais FSviatopolk, Medeiros JDutra, Geraldo JAssis, Gilbert J, Volpini ACristina, Fernandes GRocha.  2016.  ZIKV - CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms.. PLoS Negl Trop Dis. 10(6):e0004817.
2015
Gumienny R, Zavolan M.  2015.  Accurate transcriptome-wide prediction of microRNA targets and small interfering RNA off-targets with MIRZA-G.. Nucleic Acids Res. 43(3):1380-91.
Chien C-H, Chiang-Hsieh Y-F, Chen Y-A, Chow C-N, Wu N-Y, Hou P-F, Chang W-C.  2015.  AtmiRNET: a web-based resource for reconstructing regulatory networks of Arabidopsis microRNAs.. Database (Oxford). 2015:bav042.
Türei D, Földvári-Nagy L, Fazekas D, Módos D, Kubisch J, Kadlecsik T, Demeter A, Lenti K, Csermely P, Vellai T et al..  2015.  Autophagy Regulatory Network - a systems-level bioinformatics resource for studying the mechanism and regulation of autophagy.. Autophagy. 11(1):155-65.
Cutts RJ, Guerra-Assunção JAfonso, Gadaleta E, Ullah AZDayem, Chelala C.  2015.  BCCTBbp: the Breast Cancer Campaign Tissue Bank bioinformatics portal.. Nucleic Acids Res. 43(Database issue):D831-6.
Bleazard T, Lamb JA, Griffiths-Jones S.  2015.  Bias in microRNA functional enrichment analysis.. Bioinformatics. 31(10):1592-8.
Moore AC, Winkjer JS, Tseng T-T.  2015.  Bioinformatics Resources for MicroRNA Discovery.. Biomark Insights. 10(Suppl 4):53-8.
Chae H, Rhee S, Nephew KP, Kim S.  2015.  BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data.. Bioinformatics. 31(2):265-7.
Fröhlich H.  2015.  biRte: Bayesian inference of context-specific regulator activities and transcriptional networks.. Bioinformatics. 31(20):3290-8.
Meng X, Wang J, Yuan C, Li X, Zhou Y, Hofestädt R, Chen M.  2015.  CancerNet: a database for decoding multilevel molecular interactions across diverse cancer types.. Oncogenesis. 4:e177.
Vitsios DM, Enright AJ.  2015.  Chimira: analysis of small RNA sequencing data and microRNA modifications.. Bioinformatics. 31(20):3365-7.
Pio G, Ceci M, Malerba D, D'Elia D.  2015.  ComiRNet: a web-based system for the analysis of miRNA-gene regulatory networks.. BMC Bioinformatics. 16 Suppl 9:S7.
Veneziano D, Nigita G, Ferro A.  2015.  Computational Approaches for the Analysis of ncRNA through Deep Sequencing Techniques.. Front Bioeng Biotechnol. 3:77.
Bahrami-Samani E, Vo DT, de Araujo PRosa, Vogel C, Smith AD, Penalva LOF, Uren PJ.  2015.  Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput.. Wiley Interdiscip Rev RNA. 6(3):291-310.
James P, Baby B, Charles SS, Nair LSaraschand, Nazeem PAbdulla.  2015.  Computer aided gene mining for gingerol biosynthesis.. Bioinformation. 11(6):316-21.
Banwait JK, Bastola DR.  2015.  Contribution of bioinformatics prediction in microRNA-based cancer therapeutics.. Adv Drug Deliv Rev. 81:94-103.
Liu Y, Baker S, Jiang H, Stuart G, Bai Y.  2015.  Correlating bladder cancer risk genes with their targeting microRNAs using MMiRNA-Tar.. Genomics Proteomics Bioinformatics. 13(3):177-82.
Chiu H-S, Llobet-Navas D, Yang X, Chung W-J, Ambesi-Impiombato A, Iyer A, Kim HRyan, Seviour EG, Luo Z, Sehgal V et al..  2015.  Cupid: simultaneous reconstruction of microRNA-target and ceRNA networks.. Genome Res. 25(2):257-67.
Ahmed A, Ward NJ, Moxon S, Lopez-Gomollon S, Viaut C, Tomlinson ML, Patrushev I, Gilchrist MJ, Dalmay T, Dotlic D et al..  2015.  A Database of microRNA Expression Patterns in Xenopus laevis.. PLoS One. 10(10):e0138313.
Zhu Y, Li H, Guo W, Drukker K, Lan L, Giger ML, Ji Y.  2015.  Deciphering Genomic Underpinnings of Quantitative MRI-based Radiomic Phenotypes of Invasive Breast Carcinoma.. Sci Rep. 5:17787.
Martignetti L, Tesson B, Almeida A, Zinovyev A, Tucker GC, Dubois T, Barillot E.  2015.  Detection of miRNA regulatory effect on triple negative breast cancer transcriptome.. BMC Genomics. 16:S4.
Vlachos IS, Zagganas K, Paraskevopoulou MD, Georgakilas G, Karagkouni D, Vergoulis T, Dalamagas T, Hatzigeorgiou AG.  2015.  DIANA-miRPath v3.0: deciphering microRNA function with experimental support.. Nucleic Acids Res. 43(W1):W460-6.
Vlachos IS, Paraskevopoulou MD, Karagkouni D, Georgakilas G, Vergoulis T, Kanellos I, Anastasopoulos I-L, Maniou S, Karathanou K, Kalfakakou D et al..  2015.  DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions.. Nucleic Acids Res. 43(Database issue):D153-9.
Chiang K, Shu J, Zempleni J, Cui J.  2015.  Dietary MicroRNA Database (DMD): An Archive Database and Analytic Tool for Food-Borne microRNAs.. PLoS One. 10(6):e0128089.

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