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Found 1346 results
2017
Bortolomeazzi M, Gaffo E, Bortoluzzi S.  2017.  A survey of software tools for microRNA discovery and characterization using RNA-seq.. Brief Bioinform.
Li Y, Jin X, Wang Z, Li L, Chen H, Lin X, Yi S, Zhang Y, Xu J.  2017.  Systematic review of computational methods for identifying miRNA-mediated RNA-RNA crosstalk.. Brief Bioinform.
Rani J, Mittal I, Pramanik A, Singh N, Dube N, Sharma S, Puniya BLal, Raghunandanan MVarieth, Mobeen A, Ramachandran S.  2017.  T2DiACoD: A Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders.. Sci Rep. 7(1):6892.
Ma X, Liu C, Gu L, Mo B, Cao X, Chen X.  2017.  TarHunter, a tool for predicting conserved microRNA targets and target mimics in plants.. Bioinformatics.
Kim P, Park A, Han G, Sun H, Jia P, Zhao Z.  2017.  TissGDB: tissue-specific gene database in cancer.. Nucleic Acids Res.
McCall MN, Kim M-S, Adil M, Patil AH, Lu Y, Mitchell CJ, Leal-Rojas P, Xu J, Kumar M, Dawson VL et al..  2017.  Toward the human cellular microRNAome.. Genome Res. 27(10):1769-1781.
Tang W, Wan S, Yang Z, Teschendorff AE, Zou Q.  2017.  Tumor Origin Detection with Tissue-Specific miRNA and DNA methylation Markers.. Bioinformatics.
Gebert D, Hewel C, Rosenkranz D.  2017.  unitas: the universal tool for annotation of small RNAs.. BMC Genomics. 18(1):644.
Pan C-Y, Kuo W-T, Chiu C-Y, Lin W-C.  2017.  Visual Display of 5p-arm and 3p-arm miRNA Expression with a Mobile Application.. Biomed Res Int. 2017:6037168.
Fehlmann T, Backes C, Kahraman M, Haas J, Ludwig N, Posch AE, Würstle ML, Hübenthal M, Franke A, Meder B et al..  2017.  Web-based NGS data analysis using miRMaster: a large-scale meta-analysis of human miRNAs.. Nucleic Acids Res. 45(15):8731-8744.
Pandey M, Kumar R, Srivastava P, Agarwal S, Srivastava S, Nagpure NS, Jena JK, Kushwaha B.  2017.  Wgssat: A High-Throughput Computational Pipeline for Mining and Annotation of SSR Markers from Whole Genomes.. J Hered.
Sam SA, Teel J, Tegge AN, Bharadwaj A, Murali TM.  2017.  XTalkDB: a database of signaling pathway crosstalk.. Nucleic Acids Res. 45(D1):D432-D439.
Chung I-F, Chang S-J, Chen C-Y, Liu S-H, Li C-Y, Chan C-H, Shih C-C, Cheng W-C.  2017.  YM500v3: a database for small RNA sequencing in human cancer research.. Nucleic Acids Res. 45(D1):D925-D931.
2016
DiChiacchio L, Sloma MF, Mathews DH.  2016.  AccessFold: predicting RNA-RNA interactions with consideration for competing self-structure.. Bioinformatics. 32(7):1033-9.
Mickiewicz A, Rybarczyk A, Sarzynska J, Figlerowicz M, Blazewicz J.  2016.  AmiRNA Designer - new method of artificial miRNA design.. Acta Biochim Pol. 63(1):989.
Menezes RX, Mohammadi L, Goeman JJ, Boer JM.  2016.  Analysing multiple types of molecular profiles simultaneously: connecting the needles in the haystack.. BMC Bioinformatics. 17:77.
Hou M, Tang X, Tian F, Shi F, Liu F, Gao G.  2016.  AnnoLnc: a web server for systematically annotating novel human lncRNAs.. BMC Genomics. 17(1):931.
Huang Y, Wang L, Zan ALin-Sen.  2016.  ARN: analysis and prediction by adipogenic professional database.. BMC Syst Biol. 10(1):57.
Huang Y, Wang L, Zan L-S.  2016.  ARN: Analysis and Visualization System for Adipogenic Regulation Network Information.. Sci Rep. 6:39347.
Lopes Ide ON, Schliep A, de Carvalho AP de LF.  2016.  Automatic learning of pre-miRNAs from different species.. BMC Bioinformatics. 17(1):224.
Kalari KR, Thompson KJ, Nair AA, Tang X, Bockol MA, Jhawar N, Swaminathan SK, Lowe VJ, Kandimalla KK.  2016.  BBBomics-Human Blood Brain Barrier Transcriptomics Hub.. Front Neurosci. 10:71.
McCall MN, Baras AS, Crits-Christoph A, Ingersoll R, McAlexander MA, Witwer KW, Halushka MK.  2016.  A benchmark for microRNA quantification algorithms using the OpenArray platform.. BMC Bioinformatics. 17:138.
Akhtar MMauluda, Micolucci L, Islam MSoriful, Olivieri F, Procopio ADomenico.  2016.  Bioinformatic tools for microRNA dissection.. Nucleic Acids Res. 44(1):24-44.
Pirrò S, Minutolo A, Galgani A, Potestà M, Colizzi V, Montesano C.  2016.  Bioinformatics Prediction and Experimental Validation of MicroRNAs Involved in Cross-Kingdom Interaction.. J Comput Biol.
Zhou Q-Z, Zhang B, Yu Q-Y, Zhang Z.  2016.  BmncRNAdb: a comprehensive database of non-coding RNAs in the silkworm, Bombyx mori.. BMC Bioinformatics. 17(1):370.

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