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Found 11 results
Filters: Author is Paraskevopoulou, Maria D  [Clear All Filters]
2017
Zagganas K, Vergoulis T, Paraskevopoulou MD, Vlachos IS, Skiadopoulos S, Dalamagas T.  2017.  BUFET: boosting the unbiased miRNA functional enrichment analysis using bitsets.. BMC Bioinformatics. 18(1):399.
Karagkouni D, Paraskevopoulou MD, Chatzopoulos S, Vlachos IS, Tastsoglou S, Kanellos I, Papadimitriou D, Kavakiotis I, Maniou S, Skoufos G et al..  2017.  DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions.. Nucleic Acids Res.
2016
Paraskevopoulou MD, Vlachos IS, Karagkouni D, Georgakilas G, Kanellos I, Vergoulis T, Zagganas K, Tsanakas P, Floros E, Dalamagas T et al..  2016.  DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts.. Nucleic Acids Res. 44(D1):D231-8.
Vlachos IS, Vergoulis T, Paraskevopoulou MD, Lykokanellos F, Georgakilas G, Georgiou P, Chatzopoulos S, Karagkouni D, Christodoulou F, Dalamagas T et al..  2016.  DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data.. Nucleic Acids Res. 44(W1):W128-34.
Georgakilas G, Vlachos IS, Zagganas K, Vergoulis T, Paraskevopoulou MD, Kanellos I, Tsanakas P, Dellis D, Fevgas A, Dalamagas T et al..  2016.  DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators.. Nucleic Acids Res. 44(D1):D190-5.
2015
Vlachos IS, Zagganas K, Paraskevopoulou MD, Georgakilas G, Karagkouni D, Vergoulis T, Dalamagas T, Hatzigeorgiou AG.  2015.  DIANA-miRPath v3.0: deciphering microRNA function with experimental support.. Nucleic Acids Res. 43(W1):W460-6.
Vlachos IS, Paraskevopoulou MD, Karagkouni D, Georgakilas G, Vergoulis T, Kanellos I, Anastasopoulos I-L, Maniou S, Karathanou K, Kalfakakou D et al..  2015.  DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions.. Nucleic Acids Res. 43(Database issue):D153-9.
2014
Georgakilas G, Vlachos IS, Paraskevopoulou MD, Yang P, Zhang Y, Economides AN, Hatzigeorgiou AG.  2014.  microTSS: accurate microRNA transcription start site identification reveals a significant number of divergent pri-miRNAs.. Nat Commun. 5:5700.
2013
Paraskevopoulou MD, Georgakilas G, Kostoulas N, Reczko M, Maragkakis M, Dalamagas TM, Hatzigeorgiou AG.  2013.  DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs.. Nucleic Acids Res. 41(Database issue):D239-45.
Paraskevopoulou MD, Georgakilas G, Kostoulas N, Vlachos IS, Vergoulis T, Reczko M, Filippidis C, Dalamagas T, Hatzigeorgiou AG.  2013.  DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows.. Nucleic Acids Res. 41(Web Server issue):W169-73.
2012
Vlachos IS, Kostoulas N, Vergoulis T, Georgakilas G, Reczko M, Maragkakis M, Paraskevopoulou MD, Prionidis K, Dalamagas T, Hatzigeorgiou AG.  2012.  DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.. Nucleic Acids Res. 40(Web Server issue):W498-504.