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Found 9 results
Filters: Author is Maragkakis, Manolis  [Clear All Filters]
2016
Maragkakis M, Alexiou P, Nakaya T, Mourelatos Z.  2016.  CLIPSeqTools--a novel bioinformatics CLIP-seq analysis suite.. RNA. 22(1):1-9.
2013
Paraskevopoulou MD, Georgakilas G, Kostoulas N, Reczko M, Maragkakis M, Dalamagas TM, Hatzigeorgiou AG.  2013.  DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs.. Nucleic Acids Res. 41(Database issue):D239-45.
2012
Vlachos IS, Kostoulas N, Vergoulis T, Georgakilas G, Reczko M, Maragkakis M, Paraskevopoulou MD, Prionidis K, Dalamagas T, Hatzigeorgiou AG.  2012.  DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.. Nucleic Acids Res. 40(Web Server issue):W498-504.
Reczko M, Maragkakis M, Alexiou P, Grosse I, Hatzigeorgiou AG.  2012.  Functional microRNA targets in protein coding sequences.. Bioinformatics. 28(6):771-6.
Vergoulis T, Vlachos IS, Alexiou P, Georgakilas G, Maragkakis M, Reczko M, Gerangelos S, Koziris N, Dalamagas T, Hatzigeorgiou AG.  2012.  TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.. Nucleic Acids Res. 40(Database issue):D222-9.
2011
Reczko M, Maragkakis M, Alexiou P, Papadopoulos GL, Hatzigeorgiou AG.  2011.  Accurate microRNA Target Prediction Using Detailed Binding Site Accessibility and Machine Learning on Proteomics Data.. Front Genet. 2:103.
Maragkakis M, Vergoulis T, Alexiou P, Reczko M, Plomaritou K, Gousis M, Kourtis K, Koziris N, Dalamagas T, Hatzigeorgiou AG.  2011.  DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association.. Nucleic Acids Res. 39(Web Server issue):W145-8.
2010
Alexiou P, Maragkakis M, Papadopoulos GL, Simmosis VA, Zhang L, Hatzigeorgiou AG.  2010.  The DIANA-mirExTra web server: from gene expression data to microRNA function.. PLoS One. 5(2):e9171.
2009
Maragkakis M, Alexiou P, Papadopoulos GL, Reczko M, Dalamagas T, Giannopoulos G, Goumas G, Koukis E, Kourtis K, Simossis VA et al..  2009.  Accurate microRNA target prediction correlates with protein repression levels.. BMC Bioinformatics. 10:295.