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Title Votes Status Platform Latest Publication year References Links PageRank score PubMed Citation Count
novoMiRank
Average: 5 (1 vote)
 Active Web Based 2016

26635395;

 http://www.ccb.uni-saarland.de/novomirank 0.00034 7
NPInter
Average: 5 (1 vote)
 Active Web Based 2016

16381834; 24217916; 27087310;

 http://www.bioinfo.org/NPInter/ 0.00152 46
OfftargetFinder
5
Average: 4.5 (2 votes)
 Active Web Based 2016

26704598;

 http://rnai.specifly.org 0.00000 1
OmniSearch
Average: 5 (1 vote)
 Active Web Based 2016

27175225;

 http://omnisearch.soc.southalabama.edu/w/index.php, https://github.com/OmniSearch/Software 0.00000 3
P-SAMS
5
Average: 4.5 (2 votes)
 Active Web Based 2016

26382195;

 http://p-sams.carringtonlab.org 0.00028 4
PeTMbase
Average: 5 (1 vote)
 Active Web Based 2016

27936097;

 http://petmbase.org/ 0.00028 7
piRNA cluster database
Average: 5 (1 vote)
 Active Web Based 2016

26582915;

 http://www.smallrnagroup.uni-mainz.de/piRNAclusterDB.html 0.00032 7
pirnaPre
Average: 5 (1 vote)
 Active Linux/Unix, Web Based 2016

26677964;

 http://www.regulatoryrna.org/software/piRNA/piRNA_target_mRNA/index.php 0.00000 0
PlanTE-MIR DB
Average: 5 (1 vote)
 Active Web Based 2016

26887375;

 http://bioinfo-tool.cp.utfpr.edu.br/plantemirdb/ 0.00000 3
plantMirP
Average: 5 (1 vote)
 Active Linux/Unix, MAC OS 2016

27472470;

 https://github.com/yygen89/plantMirP 0.00000 0
PMF NETWORK MODEL
Average: 5 (1 vote)
 Active Web Based 2016

27341078;

 http://compgen.bio.unipd.it/pmf-net/ 0.00028 2
PmiRExAt
Average: 5 (1 vote)
 Active Web Based 2016

27081157;

 http://pmirexat.nabi.res.in 0.00028 0
Pseudo-3D Clustering
Average: 5 (1 vote)
 Active Linux/Unix, MAC OS, Windows 2016

27484480;

 http://118.178.236.158/SoyFN/P3D_Cluster.php, http://118.178.236.158/SoyFN/data/P3DClustering15.03.10.jar 0.00000 1
Psmir
5
Average: 4.5 (2 votes)
 Active Web Based 2016

26759061;

 http://www.bio-bigdata.com/Psmir/ 0.00032 4
RBP-Var
Average: 5 (1 vote)
 Active Web Based 2016

26635394;

 http://www.rbp-var.biols.ac.cn/ 0.00031 2
RDDpred
Average: 5 (1 vote)
 Active Linux/Unix, MAC OS 2016

26817607;

 http://biohealth.snu.ac.kr/software/RDDpred 0.00000 2
RiceATM
Average: 5 (1 vote)
 Active Web Based 2016

28025342;

 http://syslab3.nchu.edu.tw/rice/ 0.00028 0
RNAComposer
Average: 5 (1 vote)
 Active Web Based 2016

27741327;

 http://rnacomposer.cs.put.poznan.pl/, http://rnacomposer.ibch.poznan.pl/ 0.00000 4
RNAdualPF
Average: 5 (1 vote)
 Active Linux/Unix 2016

27756204;

 http://bioinformatics.bc.edu/clotelab/RNAdualPF 0.00028 1
RNAstructure
5
Average: 5 (2 votes)
 Active MAC OS, Web Based, Windows, Linux/Unix 2016

20230624; 23620284; 26589271;

 http://rna.urmc.rochester.edu/RNAstructure.html, http://rna.urmc.rochester.edu/RNAstructureWeb 0.00184 318
rVarBase
Average: 5 (1 vote)
 Active Web Based 2016

26503253;

 http://rv.psych.ac.cn/ 0.00028 6
SCLC
3
Average: 3 (2 votes)
 Active Web Based 2016

27247353;

 http://sclccelllines.cancer.gov 0.00000 10
SePIA
Average: 5 (1 vote)
 Active Web Based 2016

27213017;

 http://anduril.org/sepia 0.00028 0
SeqBuster
Average: 5 (1 vote)
 Active Linux/Unix, MAC OS, Web Based 2016

20008100; 21976421; 26530722;

http://github.com/lpantano/seqbuster, https://pypi.python.org/pypi/seqcluster 0.00089 52
SHARAKU
Average: 5 (1 vote)
 Active Linux/Unix, MAC OS 2016

27307639;

 http://www.dna.bio.keio.ac.jp/sharaku/ 0.00028 0

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