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Contextual Refinement of Regulatory Targets Reveals Effects on Breast Cancer Prognosis of the Regulome.. PLoS Comput Biol. 13(1):e1005340.
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2017. CircNet: a database of circular RNAs derived from transcriptome sequencing data.. Nucleic Acids Res. 44(D1):D209-15.
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2016. Loregic: a method to characterize the cooperative logic of regulatory factors.. PLoS Comput Biol. 11(4):e1004132.
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2015.