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miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets.. Bioinformatics. 33(16):2446-2454.
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2017. A Database of microRNA Expression Patterns in Xenopus laevis.. PLoS One. 10(10):e0138313.
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2015. MirPlex: a tool for identifying miRNAs in high-throughput sRNA datasets without a genome.. J Exp Zool B Mol Dev Evol. 320(1):47-56.
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2013. PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing.. Nucleic Acids Res. 40(13):e103.
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2012. The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets.. Bioinformatics. 28(15):2059-61.
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2012. RNAcentral: A vision for an international database of RNA sequences.. RNA. 17(11):1941-6.
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2011. A scoring matrix approach to detecting miRNA target sites.. Algorithms Mol Biol. 3:3.
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2008. A toolkit for analysing large-scale plant small RNA datasets.. Bioinformatics. 24(19):2252-3.
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2008. Rfam: annotating non-coding RNAs in complete genomes.. Nucleic Acids Res. 33(Database issue):D121-4.
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