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sRNAtoolbox: an integrated collection of small RNA research tools.. Nucleic Acids Res. 43(W1):W467-73.
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2015. miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments.. Nucleic Acids Res. 39(Web Server issue):W132-8.
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2011. WordCluster: detecting clusters of DNA words and genomic elements.. Algorithms Mol Biol. 6:2.
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2011. TargetSpy: a supervised machine learning approach for microRNA target prediction.. BMC Bioinformatics. 11:292.
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2010. miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments.. Nucleic Acids Res. 37(Web Server issue):W68-76.
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2009.