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Tags

Methods

	Title	Votes	Status	Platform	Latest Publication year	References
Show Details	mirclust	Give mirclust 1/5 Give mirclust 2/5 Give mirclust 3/5 Give mirclust 4/5 Give mirclust 5/5 Average: 5 (1 vote)	Active	Web Based	2009	19059941;
Show Details	miRecords	4 Average: 3.5 (2 votes)	Active	Web Based	2009	18996891;
Show Details	miRExpress	Give miRExpress 1/5 Give miRExpress 2/5 Give miRExpress 3/5 Give miRExpress 4/5 Give miRExpress 5/5 Average: 5 (1 vote)	Active	Linux/Unix, MAC OS	2009	19821977;
Show Details	miRNA_code	Give miRNA_code 1/5 Give miRNA_code 2/5 Give miRNA_code 3/5 Give miRNA_code 4/5 Give miRNA_code 5/5 Average: 5 (1 vote)	Active	Linux/Unix, MAC OS, Windows	2009	20015389;
Show Details	miRo	Give miRo 1/5 Give miRo 2/5 Give miRo 3/5 Give miRo 4/5 Give miRo 5/5 Average: 5 (1 vote)	Active	Web Based	2009	20157481;
Show Details	miROrtho	Give miROrtho 1/5 Give miROrtho 2/5 Give miROrtho 3/5 Give miROrtho 4/5 Give miROrtho 5/5 Average: 5 (1 vote)	Active	Web Based	2009	18927110;
Show Details	MirZ	4 Average: 3.5 (2 votes)	Active	Web Based	2009	19468042;
Show Details	MMIA	Give MMIA 1/5 Give MMIA 2/5 Give MMIA 3/5 Give MMIA 4/5 Give MMIA 5/5 Average: 5 (1 vote)	Active	Web Based	2009	19420067;
Show Details	ncRNAppi	Give ncRNAppi 1/5 Give ncRNAppi 2/5 Give ncRNAppi 3/5 Give ncRNAppi 4/5 Give ncRNAppi 5/5 Average: 5 (1 vote)	Dead	Web Based	2009	19808883;
Show Details	PDbase	Give PDbase 1/5 Give PDbase 2/5 Give PDbase 3/5 Give PDbase 4/5 Give PDbase 5/5 Average: 5 (1 vote)	Active	Web Based	2009	19958497;
Show Details	PerM	Give PerM 1/5 Give PerM 2/5 Give PerM 3/5 Give PerM 4/5 Give PerM 5/5 Average: 5 (1 vote)	Active	Linux/Unix, MAC OS, Windows	2009	19675096;
Show Details	PGnet	Give PGnet 1/5 Give PGnet 2/5 Give PGnet 3/5 Give PGnet 4/5 Give PGnet 5/5 Average: 5 (1 vote)	Dead	Web Based	2009	19761576;
Show Details	piRNA	Give piRNA 1/5 Give piRNA 2/5 Give piRNA 3/5 Give piRNA 4/5 Give piRNA 5/5 Average: 5 (1 vote)	Active	Linux/Unix, MAC OS	2009	19478011;
Show Details	QuickMap	Give QuickMap 1/5 Give QuickMap 2/5 Give QuickMap 3/5 Give QuickMap 4/5 Give QuickMap 5/5 Average: 5 (1 vote)	Dead	Web Based	2009	19387483;
Show Details	RCoS	Give RCoS 1/5 Give RCoS 2/5 Give RCoS 3/5 Give RCoS 4/5 Give RCoS 5/5 Average: 5 (1 vote)	Active	Windows	2009	19946373;
Show Details	recit	Give recit 1/5 Give recit 2/5 Give recit 3/5 Give recit 4/5 Give recit 5/5 Average: 5 (1 vote)	Dead	Web Based	2009	19553345;
Show Details	RISCbinder	Give RISCbinder 1/5 Give RISCbinder 2/5 Give RISCbinder 3/5 Give RISCbinder 4/5 Give RISCbinder 5/5 Average: 5 (1 vote)	Active	Web Based	2009	19358699;
Show Details	RNAither	Give RNAither 1/5 Give RNAither 2/5 Give RNAither 3/5 Give RNAither 4/5 Give RNAither 5/5 Average: 5 (1 vote)	Active	Linux/Unix, MAC OS, Windows	2009	19168909;
Show Details	segemehl	5 Average: 5 (2 votes)	Active	Linux/Unix, MAC OS	2009	19750212;
Show Details	siDesign	Give siDesign 1/5 Give siDesign 2/5 Give siDesign 3/5 Give siDesign 4/5 Give siDesign 5/5 Average: 5 (1 vote)	Active	Web Based	2009	19846596;
Show Details	siDirect	Give siDirect 1/5 Give siDirect 2/5 Give siDirect 3/5 Give siDirect 4/5 Give siDirect 5/5 Average: 5 (1 vote)	Active	Web Based	2009	15215364; 15564304; 19948054;
Show Details	siRecords	Give siRecords 1/5 Give siRecords 2/5 Give siRecords 3/5 Give siRecords 4/5 Give siRecords 5/5 Average: 5 (1 vote)	Active	Web Based	2009	16443930; 18996894;
Show Details	SNPinfo	5 Average: 5 (2 votes)	Active	Web Based	2009	19417063;
Show Details	SNPLogic	Give SNPLogic 1/5 Give SNPLogic 2/5 Give SNPLogic 3/5 Give SNPLogic 4/5 Give SNPLogic 5/5 Average: 5 (1 vote)	Active	Web Based	2009	18984625;
Show Details	SOAP	5 Average: 5 (2 votes)	Active	Linux/Unix, MAC OS	2009	18227114; 19497933;

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Brief Introduction

Our database aim to make it easy for researchers to find the right tools or data source for their own specific study in miRNA field. Now we have collect >1000 tools. This database will update when every new 100 tools add in. Last update time 22nd April, 2018 (v1.2).

Updates History:

v1.1: 15th September, 2017 (970 tools)
v1.0: 1st October, 2016 (883 tools)

Latest Tools

	Tiresias
	Director
	DMTHNDM
	Exo-miRExplorer
	DisSetSim

Popular Tools

	miRBase
	Rfam
	MiRscan
	miRanda (microRNA.org)
	TargetScan
	miRNA - Target Gene Prediction at EMBL
	PicTar
	RNAhybrid
	RNAz
	ViennaRNA
	DIANA-TarBase
	miRDeep
	smiRNAdb
	DIANA-microT
	PITA