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miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data.

Title	miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data.
Publication Type	Journal Article
Authors	An J, Lai J, Lehman ML, Nelson CC
PubMed ID	23221645
PubMed Central ID	PMC3553977

Search miRNA Tools

Brief Introduction

Our database aim to make it easy for researchers to find the right tools or data source for their own specific study in miRNA field. Now we have collect >1000 tools. This database will update when every new 100 tools add in. Last update time 22nd April, 2018 (v1.2).

Updates History:

v1.1: 15th September, 2017 (970 tools)
v1.0: 1st October, 2016 (883 tools)

Latest Tools

	Tiresias
	Director
	DMTHNDM
	DisSetSim
	miRnalyze

Popular Tools

	miRBase
	Rfam
	MiRscan
	miRanda (microRNA.org)
	TargetScan
	miRNA - Target Gene Prediction at EMBL
	PicTar
	RNAhybrid
	RNAz
	ViennaRNA
	DIANA-TarBase
	miRDeep
	smiRNAdb
	DIANA-microT
	PITA

Tags in Tags

Association Cancer/Tumor Disease Expression Profiles Identification Interactions miRNA Binding Site miRNA Prediction Next Generation Sequencing (NGS) Regulatory Network Target Gene Target Prediction

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