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Found 19 results
Filters: Author is Huang, Hsien-Da  [Clear All Filters]
2017
Chou C-H, Shrestha S, Yang C-D, Chang N-W, Lin Y-L, Liao K-W, Huang W-C, Sun T-H, Tu S-J, Lee W-H et al..  2017.  miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions.. Nucleic Acids Res.
2016
Liu Y-C, Li J-R, Sun C-H, Andrews E, Chao R-F, Lin F-M, Weng S-L, Da Hsu S-, Huang C-C, Cheng C et al..  2016.  CircNet: a database of circular RNAs derived from transcriptome sequencing data.. Nucleic Acids Res. 44(D1):D209-15.
Chou C-H, Chang N-W, Shrestha S, Da Hsu S-, Lin Y-L, Lee W-H, Yang C-D, Hong H-C, Wei T-Y, Tu S-J et al..  2016.  miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database.. Nucleic Acids Res. 44(D1):D239-47.
2015
Huang W-Y, Da Hsu S-, Huang H-Y, Sun Y-M, Chou C-H, Weng S-L, Da Huang H-.  2015.  MethHC: a database of DNA methylation and gene expression in human cancer.. Nucleic Acids Res. 43(Database issue):D856-61.
2014
Hsieh WJ, Lin F-M, Da Huang H-, Wang H.  2014.  Investigating microRNA-target interaction-supported tissues in human cancer tissues based on miRNA and target gene expression profiling.. PLoS One. 9(4):e95697.
Chan W-L, Da Huang H-, Chang J-G.  2014.  lncRNAMap: a map of putative regulatory functions in the long non-coding transcriptome.. Comput Biol Chem. 50:41-9.
Da Hsu S-, Tseng Y-T, Shrestha S, Lin Y-L, Khaleel A, Chou C-H, Chu C-F, Huang H-Y, Lin C-M, Ho S-Y et al..  2014.  miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions.. Nucleic Acids Res. 42(Database issue):D78-85.
2013
Chou C-H, Lin F-M, Chou M-T, Da Hsu S-, Chang T-H, Weng S-L, Shrestha S, Hsiao C-C, Hung J-H, Da Huang H-.  2013.  A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing.. BMC Genomics. 14 Suppl 1:S2.
Chang T-H, Huang H-Y, Hsu JBo-Kai, Weng S-L, Horng J-T, Da Huang H-.  2013.  An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs.. BMC Bioinformatics. 14 Suppl 2:S4.
Chan W-L, Yang W-K, Da Huang H-, Chang J-G.  2013.  pseudoMap: an innovative and comprehensive resource for identification of siRNA-mediated mechanisms in human transcribed pseudogenes.. Database (Oxford). 2013:bat001.
2011
Hsu JBo-Kai, Chiu C-M, Da Hsu S-, Huang W-Y, Chien C-H, Lee T-Y, Da Huang H-.  2011.  miRTar: an integrated system for identifying miRNA-target interactions in human.. BMC Bioinformatics. 12:300.
Da Hsu S-, Lin F-M, Wu W-Y, Liang C, Huang W-C, Chan W-L, Tsai W-T, Chen G-Z, Lee C-J, Chiu C-M et al..  2011.  miRTarBase: a database curates experimentally validated microRNA-target interactions.. Nucleic Acids Res. 39(Database issue):D163-9.
Bateman A, Agrawal S, Birney E, Bruford EA, Bujnicki JM, Cochrane G, Cole JR, Dinger ME, Enright AJ, Gardner PP et al..  2011.  RNAcentral: A vision for an international database of RNA sequences.. RNA. 17(11):1941-6.
2009
Wang W-C, Lin F-M, Chang W-C, Lin K-Y, Da Huang H-, Lin N-S.  2009.  miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression.. BMC Bioinformatics. 10:328.
Huang H-Y, Chang H-Y, Chou C-H, Tseng C-P, Ho S-Y, Yang C-D, Ju Y-W, Da Huang H-.  2009.  sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes.. Nucleic Acids Res. 37(Database issue):D150-4.
2008
Da Hsu S-, Chu C-H, Tsou A-P, Chen S-J, Chen H-C, Hsu PWei-Che, Wong Y-H, Chen Y-H, Chen G-H, Da Huang H-.  2008.  miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes.. Nucleic Acids Res. 36(Database issue):D165-9.
2007
Hsu PWei-Che, Lin L-Z, Da Hsu S-, Hsu JBo-Kai, Da Huang H-.  2007.  ViTa: prediction of host microRNAs targets on viruses.. Nucleic Acids Res. 35(Database issue):D381-5.
2006
Hsu PWC, Da Huang H-, Da Hsu S-, Lin L-Z, Tsou A-P, Tseng C-P, Stadler PF, Washietl S, Hofacker IL.  2006.  miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes.. Nucleic Acids Res. 34(Database issue):D135-9.
Huang H-Y, Chien C-H, Jen K-H, Da Huang H-.  2006.  RegRNA: an integrated web server for identifying regulatory RNA motifs and elements.. Nucleic Acids Res. 34(Web Server issue):W429-34.